STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydbDPutative manganese catalase. (280 aa)    
Predicted Functional Partners:
EMR00836.1
Hypothetical protein.
    0.974
sodA
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.762
EMR00702.1
Putative oxidoreductase.
 
    0.718
splB
Spore photoproduct lyase.
  
     0.608
fdhA
Glutathione-independent formaldehyde dehydrogenase.
 
    0.599
fdm
Formaldehyde dismutase.
 
    0.566
EMR03450.1
Hypothetical protein.
  
   
 0.553
EMR00835.1
Hydroxyacylglutathione hydrolase.
  
     0.536
EMR00694.1
Hypothetical protein.
  
   
 0.533
EMR00981.1
Putative integral membrane protein.
 
    0.508
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.