STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMR04118.1Hypothetical protein. (362 aa)    
Predicted Functional Partners:
EMR04117.1
Hypothetical protein.
 
     0.949
EMR03790.1
Outer membrane protein/protective antigen OMA87.
  
     0.775
EMR03791.1
Outer membrane protein/protective antigen OMA87.
  
     0.775
EMR03022.1
Cell surface protein SprA.
  
     0.775
EMR02876.1
Outer membrane receptor for ferrienterochelin and colicin.
  
     0.724
EMR04556.1
Peptidase family C25.
 
     0.695
EMR02009.1
Hypothetical protein.
  
     0.692
surA_2
Peptidyl-prolyl cis-trans isomerase surA.
  
   
 0.682
EMR02924.1
Hypothetical protein.
  
     0.666
EMR03618.1
Two component regulator propeller.
  
     0.652
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.