STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdtaRPutative transcriptional regulatory protein pdtaR. (120 aa)    
Predicted Functional Partners:
luxQ_1
Autoinducer 2 sensor kinase/phosphatase luxQ.
 
 0.999
cph1_1
Phytochrome-like protein cph1.
 
 0.999
barA_1
Signal transduction histidine-protein kinase BarA.
 
 0.999
pleC_5
Non-motile and phage-resistance protein.
  
 0.999
arcB_3
Aerobic respiration control sensor protein ArcB.
 
0.997
kinB_2
Alginate biosynthesis sensor protein kinB.
 
 0.997
cph1_13
Phytochrome-like protein cph1.
  
 0.997
EMR01801.1
Nitrate and nitrite sensing.
  
 0.997
luxQ_6
Autoinducer 2 sensor kinase/phosphatase luxQ.
  
 0.997
arcB_4
Aerobic respiration control sensor protein ArcB.
 
 0.996
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.