STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMR03978.1Hypothetical protein. (100 aa)    
Predicted Functional Partners:
EMR03977.1
Hypothetical protein.
       0.773
EMR03976.1
cyclic-di-GMP phosphodiesterase.
       0.746
srrA_1
Respiratory response protein A.
       0.746
cheA
Chemotaxis protein CheA.
       0.746
cheW
Chemotaxis protein CheW.
       0.746
trg
Ribose and galactose chemoreceptor protein.
       0.655
pdtaS_2
Putative sensor histidine kinase pdtaS.
       0.466
aer
Aerotaxis receptor.
       0.466
pdtaR
Putative transcriptional regulatory protein pdtaR.
       0.444
EMR03983.1
Phosphate-selective porin.
       0.404
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.