STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cynT_1Carbonic anhydrase. (210 aa)    
Predicted Functional Partners:
ychM_1
Putative sulfate transporter ychM.
 
 0.961
EMR02324.1
Hypothetical protein.
    
 0.868
dapH
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase.
    
 0.868
EMR03928.1
Putative membrane protein.
       0.728
EMR03926.1
Glutamyl- and glutaminyl-tRNA synthetase.
       0.450
can
Carbonic anhydrase 2; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 
0.445
EMR03929.1
Hypothetical protein.
       0.408
ychM_2
Putative sulfate transporter ychM.
 
 
 0.403
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.