STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bcsA_1Cellulose synthase catalytic subunit. (517 aa)    
Predicted Functional Partners:
celH
Endoglucanase H precursor; Belongs to the glycosyl hydrolase 26 family.
     0.992
EMR03955.1
Endo-beta-mannanase.
 
  
  0.698
EMR00691.1
Hypothetical protein.
  
     0.607
otsA
Trehalose-phosphate synthase.
  
 
 0.598
EMR01680.1
Hypothetical protein; Por secretion system C-terminal sorting domain.
  
     0.496
EMR04080.1
Lipoprotein NlpI.
  
 
 0.484
icaA_2
Poly-beta-1,6-N-acetyl-D-glucosamine synthase.
  
     0.462
crnA
Creatinine amidohydrolase.
  
  
 0.416
EMR03161.1
Endoglucanase precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
  0.407
EMR03953.1
Putative tyrosine-protein kinase in cps region.
 
  
 0.406
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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