STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asnCRegulatory protein AsnC. (158 aa)    
Predicted Functional Partners:
porA
Pyruvate synthase subunit porA.
    
  0.838
EMR03300.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.648
EMR03140.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.648
sufB
FeS cluster assembly protein sufB.
       0.486
ilvB
Acetolactate synthase large subunit; Belongs to the TPP enzyme family.
   
 
 0.486
cysG
Siroheme synthase.
  
 
 0.457
sirC
Precorrin-2 dehydrogenase.
    
  0.442
leuC
3-isopropylmalate dehydratase large subunit.
    
 0.441
recG
ATP-dependent DNA helicase recG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
    
 0.439
leuD
3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.
    
  0.438
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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