STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMR03911.1FeS assembly SUF system protein. (122 aa)    
Predicted Functional Partners:
sufC
Putative ATP-dependent transporter SufC.
  
 0.972
sufB
FeS cluster assembly protein sufB.
   
 0.956
sufE
Cysteine desulfuration protein sufE.
     0.954
sufD
FeS cluster assembly protein sufD.
   
 0.952
sufS_1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    0.950
hmp
3-ketosteroid-9-alpha-hydroxylase reductase subunit.
  
 
 0.798
EMR03909.1
Cysteine desulfurase, SufS family.
  
    0.795
EMR04562.1
phenylacetate-CoA oxygenase subunit PaaB.
  
 
 0.721
EMR03912.1
Hypothetical protein; Belongs to the UPF0403 family.
  
    0.577
boxD
3,4-dehydroadipyl-CoA semialdehyde dehydrogenase.
  
  
 0.495
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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