STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arnB_2UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (364 aa)    
Predicted Functional Partners:
wcaJ_2
Putative colanic biosynthesis UDP-glucose lipid carrier transferase.
 
 
 0.958
wcaJ_4
Putative colanic biosynthesis UDP-glucose lipid carrier transferase.
 
 
 0.958
rfbB
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.905
maa
Maltose O-acetyltransferase.
  
 
 0.743
vatD
Streptogramin A acetyltransferase.
  
 
 0.743
EMR03704.1
Methyltransferase, FkbM family.
       0.706
dapH
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase.
  
  0.701
hmp
3-ketosteroid-9-alpha-hydroxylase reductase subunit.
  
 
 0.685
algD
GDP-mannose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.678
yvaA
Putative oxidoreductase yvaA.
 
 
 0.664
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.