STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMR03630.1Epimerase family protein. (302 aa)    
Predicted Functional Partners:
EMR02410.1
Short chain dehydrogenase.
 
    0.595
yvdD_1
LOG family protein yvdD.
       0.556
EMR03631.1
Hypothetical protein.
       0.552
EMR04781.1
Putative stress protein (general stress protein 26).
   
    0.550
EMR03901.1
Putative stress protein (general stress protein 26).
   
    0.550
EMR02053.1
Hypothetical protein.
  
    0.536
EMR03136.1
Hypothetical protein.
   
    0.513
EMR00630.1
ZIP Zinc transporter.
  
    0.509
EMR04752.1
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
   
    0.497
EMR02121.1
Chromosome segregation protein SMC.
   
    0.497
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.