STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMR03487.1Arylsulfatase; Overlaps CDS with the same product name. (127 aa)    
Predicted Functional Partners:
EMR03486.1
Arylsulfatase; Overlaps CDS with the same product name.
     0.994
EMR03485.1
Uncharacterized protein conserved in bacteria.
 
     0.755
EMR02378.1
Hypothetical protein; Domain of Unknown Function (DUF1080).
  
 
  0.622
degP
Periplasmic serine endoprotease DegP precursor.
  
    0.606
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.528
EMR03955.1
Endo-beta-mannanase.
  
 0.517
pkn1_1
Serine/threonine-protein kinase pkn1.
 
   0.503
EMR03244.1
Hypothetical protein.
   
   0.497
EMR00967.1
Hypothetical protein; Domain of unknown function (DUF303).
  
  
  0.497
EMR02832.1
Hypothetical protein; Domain of unknown function (DUF368).
  
  
  0.492
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.