STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
snaCNADH:FMN oxidoreductase. (142 aa)    
Predicted Functional Partners:
sir
Sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
  0.498
limB
Limonene 1,2-monooxygenase.
 
 
 0.495
apaH
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical.
 
  
  0.494
EMR03160.1
Nicotinamidase/pyrazinamidase.
  
 
  0.484
EMR03012.1
ABC-type taurine transport system, periplasmic component.
  
 
  0.481
EMR03550.1
Putative flavoprotein.
    
 0.470
catE
Catechol-2,3-dioxygenase.
    
  0.442
EMR02056.1
Hypothetical protein.
  
     0.440
ribF
Riboflavin biosynthesis protein ribF; Belongs to the ribF family.
    
  0.439
punA
Purine nucleoside phosphorylase 1; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
  0.438
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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