STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrB_2Peptide methionine sulfoxide reductase MsrB. (115 aa)    
Predicted Functional Partners:
msrB_3
Peptide methionine sulfoxide reductase MsrB.
 
    
0.819
mrsA_2
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 
 0.809
msrA
Peptide methionine sulfoxide reductase MsrA.
 
 
 0.786
mrsA_1
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 
 0.779
EMR03800.1
Thiol:disulfide interchange protein precursor.
    
 
 0.733
dsbD
Thiol:disulfide interchange protein DsbD precursor.
    
 
 0.733
EMR03224.1
Thiol:disulfide interchange protein precursor.
    
 
 0.733
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.539
rplQ
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
    
   0.495
rpmJ
Ribosomal protein B; Belongs to the bacterial ribosomal protein bL36 family.
    
   0.495
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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