STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
egtDHistidine-specific methyltransferase EgtD. (368 aa)    
Predicted Functional Partners:
egtB
Iron(II)-dependent oxidoreductase EgtB.
 
 0.996
pkn1_2
Serine/threonine-protein kinase pkn1.
 
 
 0.656
pkn1_1
Serine/threonine-protein kinase pkn1.
 
 
 0.655
EMR01944.1
Gliding motility-associated lipoprotein GldJ.
 
 
 0.649
EMR01880.1
Hypothetical protein; Domain of unknown function (DUF427).
 
     0.604
EMR01495.1
Putative manganese-dependent inorganic pyrophosphatase.
  
  
 0.433
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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