STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hbpAHemin-binding lipoprotein. (587 aa)    
Predicted Functional Partners:
gsiD
Glutathione transport system permease protein gsiD.
 0.967
dppB
Dipeptide transport system permease protein dppB.
 0.964
gsiA
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
 0.896
porA
Pyruvate synthase subunit porA.
  
    0.834
pleC_5
Non-motile and phage-resistance protein.
    
 0.693
EMR03300.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
    0.631
EMR03140.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
    0.631
EMR03105.1
Hypothetical protein.
       0.616
exoA
Exodeoxyribonuclease.
       0.599
ybeY
Putative rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.593
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.