STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdhB1Formate dehydrogenase iron-sulfur subunit. (1030 aa)    
Predicted Functional Partners:
EMR03038.1
Hypothetical protein.
 
 0.999
EMR03035.1
Hypothetical protein.
 
 
 0.997
EMR03037.1
Protein of unknown function (DUF3341).
 
 0.996
EMR03040.1
Cytochrome c, mono- and diheme variant.
 0.992
EMR01430.1
Hypothetical protein.
  
 0.985
EMR03036.1
Putative bifunctional cbb3-type cytochrome c oxidase subunit II/cytochrome c.
 
  
  0.968
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.949
EMR02390.1
Cytochrome c, mono- and diheme variant.
 
 0.944
porA
Pyruvate synthase subunit porA.
  
 
 0.935
ccoP1
Cytochrome c oxidase subunit III.
 
 0.882
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.