STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMR03043.1N-glycosyltransferase. (394 aa)    
Predicted Functional Partners:
wbbL_3
dTDP-Rha:alpha-D-GlcNAc-pyrophosphate polyprenol, alpha-3-L-rhamnosyltransferase.
 
     0.929
wcaJ_3
Putative colanic biosynthesis UDP-glucose lipid carrier transferase.
 
    0.847
phoB_2
Phosphate regulon transcriptional regulatory protein phoB.
 
     0.818
EMR04644.1
Lipid A core - O-antigen ligase.
 
   
 0.799
icaA_1
Poly-beta-1,6-N-acetyl-D-glucosamine synthase.
 
     0.792
EMR04641.1
Hypothetical protein.
 
     0.785
EMR03108.1
Colanic acid exporter.
 
    0.762
EMR04642.1
Hypothetical protein.
 
     0.731
EMR04647.1
Fibronectin type III domain protein.
 
     0.694
EMR04640.1
Cryptic autophosphorylating protein tyrosine kinase Etk.
 
  
 0.676
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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