STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMR02973.1Heme exporter protein CcmC. (224 aa)    
Predicted Functional Partners:
EMR02974.1
CcmB protein.
 
 0.999
EMR02971.1
Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
 
 
 0.997
EMR00807.1
Putative ABC transporter ATP-binding protein.
 
 0.990
ccmF
Cytochrome c-type biogenesis protein CcmF.
 
  
 0.934
EMR02972.1
Hypothetical protein.
 
     0.903
EMR04552.1
Translocation protein TolB.
  
     0.615
EMR02450.1
Putative enzyme of heme biosynthesis.
  
     0.540
EMR00975.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.533
EMR03787.1
uroporphyrinogen-III synthase.
  
    0.528
EMR02975.1
Hypothetical protein.
       0.526
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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