STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pkn1_2Serine/threonine-protein kinase pkn1. (397 aa)    
Predicted Functional Partners:
EMR00763.1
Gliding motility-associated lipoprotein GldD.
  
   
 0.807
EMR03784.1
Gliding motility-associated protein GldL.
 
   
 0.801
EMR03783.1
Gliding motility-associated protein GldM.
 
   
 0.785
EMR03560.1
Gliding-associated putative ABC transporter substrate-binding component GldG.
  
   
 0.772
EMR03559.1
Gliding-associated putative ABC transporter substrate-binding component GldG.
  
   
 0.762
EMR01823.1
Putative methyltransferase (contains TPR repeat).
  
   
 0.761
EMR03595.1
Hypothetical protein.
 
   
 0.746
oprF_2
Outer membrane porin F precursor.
 
  
 0.740
EMR01668.1
Bacteroidetes-specific putative membrane protein.
 
     0.732
EMR02102.1
Hypothetical protein.
  
     0.719
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.