STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macB_3Macrolide export ATP-binding/permease protein MacB. (809 aa)    
Predicted Functional Partners:
lolD_1
Lipoprotein-releasing system ATP-binding protein LolD.
 
   0.939
macB_1
Macrolide export ATP-binding/permease protein MacB.
  
   0.878
EMR02748.1
Putative efflux pump membrane fusion protein.
 
   0.871
EMR03960.1
Outer membrane channel protein.
 
   0.803
zraS_2
Sensor protein ZraS.
 
     0.774
lolD_5
Lipoprotein-releasing system ATP-binding protein LolD.
 
   0.773
macB_4
Macrolide export ATP-binding/permease protein MacB.
 
    
0.663
macB_5
Macrolide export ATP-binding/permease protein MacB.
 
    
0.658
zraR_4
Transcriptional regulatory protein ZraR.
  
     0.651
macB_7
Macrolide export ATP-binding/permease protein MacB.
 
   
0.645
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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