STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yegTPutative nucleoside transporter yegT. (415 aa)    
Predicted Functional Partners:
hyi
Hydroxypyruvate isomerase.
 
     0.939
EMR02373.1
Gluconate 2-dehydrogenase flavoprotein precursor.
 
     0.862
EMR02372.1
Hypothetical protein.
 
     0.807
iolG
Inositol 2-dehydrogenase.
 
     0.692
EMR00883.1
Hypothetical protein.
 
     0.647
EMR00884.1
Gluconate 2-dehydrogenase flavoprotein precursor.
 
     0.628
EMR02378.1
Hypothetical protein; Domain of Unknown Function (DUF1080).
 
     0.626
ydgJ
Putative oxidoreductase ydgJ.
 
     0.553
ndk
Nucleoside diphosphate kinase; Belongs to the NDK family.
    
  0.412
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
    
  0.412
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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