STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prlCOligopeptidase A. (677 aa)    
Predicted Functional Partners:
cph1_17
Phytochrome-like protein cph1.
  
    0.616
cheB_3
Chemotaxis response regulator protein-glutamate methylesterase.
       0.611
gloA
Lactoylglutathione lyase.
  
    0.595
EMR01400.1
Hypothetical protein; Alanine dehydrogenase/PNT, N-terminal domain.
 
      0.503
mlhB
Monoterpene epsilon-lactone hydrolase.
     
 0.441
EMR01801.1
Nitrate and nitrite sensing.
  
    0.424
luxQ_6
Autoinducer 2 sensor kinase/phosphatase luxQ.
  
    0.424
cheR_3
Chemotaxis protein methyltransferase.
       0.415
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.