STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMR01732.1Hypothetical protein; Belongs to the UPF0758 family. (245 aa)    
Predicted Functional Partners:
maf
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
  
 0.858
EMR02964.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
  
 0.848
EMR02896.1
DNA utilization protein GntX.
  
    0.817
EMR03517.1
Hybrid sensory histidine kinase BarA.
   
    0.686
mutS_2
DNA mismatch repair protein mutS; Overlaps CDS with the same product name; Belongs to the DNA mismatch repair MutS family.
 
   
 0.605
mutL_1
DNA mismatch repair protein mutL; Overlaps CDS with the same product name.
 
   
 0.588
mutS_1
DNA mismatch repair protein mutS; Overlaps CDS with the same product name.
 
   
 0.571
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.
       0.550
mutL_2
DNA mismatch repair protein mutL; Overlaps CDS with the same product name; Belongs to the DNA mismatch repair MutL/HexB family.
 
   
 0.520
arcB_3
Aerobic respiration control sensor protein ArcB.
  
    0.517
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.