STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMR01713.11-pyrroline-5-carboxylate dehydrogenase. (52 aa)    
Predicted Functional Partners:
porA
Pyruvate synthase subunit porA.
  
 0.917
gltB
Ferredoxin-dependent glutamate synthase 1.
  
 
 0.903
rocD2
Ornithine aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.891
pxpA
Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
   
 
  0.887
fadM_1
Proline dehydrogenase 1.
 
 0.886
EMR02848.1
Aspartate aminotransferase.
   
 0.864
aldHT
Aldehyde dehydrogenase, thermostable.
 
  
  0.855
gdhA_1
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.855
gltD_2
Glutamate synthase [NADPH] small chain.
    
 0.853
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
   
 
 0.853
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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