STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bepE_2Efflux pump membrane transporter BepE; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1002 aa)    
Predicted Functional Partners:
ttgA
Putative efflux pump periplasmic linker ttgA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.977
oprM_3
Outer membrane protein oprM precursor.
  0.968
macA_1
Macrolide-specific efflux protein macA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.916
czcB
Cation efflux system protein CzcB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.906
bepF
Efflux pump periplasmic linker BepF; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.865
mexA
Multidrug resistance protein mexA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.757
oprM_1
Outer membrane protein oprM precursor; Overlaps CDS with the same product name.
 
  0.735
EMR01117.1
Outer membrane channel protein.
   
  0.709
secD
Hypothetical protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
   
 
 0.649
oprM_2
Outer membrane protein oprM precursor; Overlaps CDS with the same product name.
 
  0.623
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.