STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sacC_4Levanase precursor; Belongs to the glycosyl hydrolase 32 family. (690 aa)    
Predicted Functional Partners:
ydjH_2
Putative sugar kinase ydjH.
 
 0.911
luxQ_1
Autoinducer 2 sensor kinase/phosphatase luxQ.
 
  
 0.725
EMR04673.1
SusD family protein.
 
     0.723
xylE_2
D-xylose transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
     0.624
ydjH_1
Putative sugar kinase ydjH.
 
 
 0.459
EMR04674.1
Outer membrane cobalamin receptor protein.
  
     0.457
strL
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
 
 0.403
EMR03161.1
Endoglucanase precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.402
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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