STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMR01517.1VCBS repeat protein. (1882 aa)    
Predicted Functional Partners:
EMR01515.1
Minor outer membrane protein Omp16.
 
     0.843
EMR01516.1
Bacteroidetes-specific putative membrane protein.
       0.773
yfaY
CinA-like protein; Belongs to the CinA family.
     
 0.643
EMR03022.1
Cell surface protein SprA.
   
   0.576
EMR03958.1
Hypothetical protein; Gliding motility-associated C-terminal domain.
  
 
0.503
EMR01935.1
Hypothetical protein; Gliding motility-associated C-terminal domain.
  
 
0.491
EMR04167.1
HYR domain protein.
 
 
0.488
EMR00937.1
Delta-60 repeat domain protein.
 
     0.485
EMR01642.1
Hypothetical protein.
  
  0.484
EMR01398.1
Putative ATPase.
  
    0.480
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.