STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMR01468.1Site-specific tyrosine recombinase XerC; Belongs to the 'phage' integrase family. (419 aa)    
Predicted Functional Partners:
EMR04448.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.720
xerD_6
Tyrosine recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.663
porA
Pyruvate synthase subunit porA.
    
  0.646
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.572
EMR04161.1
Site-specific tyrosine recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.566
xerD_2
Tyrosine recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.500
EMR02600.1
Outer membrane cobalamin receptor protein.
  
     0.487
EMR02896.1
DNA utilization protein GntX.
   
    0.480
EMR01708.1
Outer membrane cobalamin receptor protein.
  
     0.477
EMR01467.1
DNA binding domain, excisionase family.
       0.448
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.