STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dapH2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase. (212 aa)    
Predicted Functional Partners:
cynT_1
Carbonic anhydrase.
    
 0.868
can
Carbonic anhydrase 2; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 0.868
cynT_2
Carbonic anhydrase.
    
 0.868
wcaJ_1
Putative colanic biosynthesis UDP-glucose lipid carrier transferase.
     0.763
arnB_2
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  0.701
EMR01451.1
Hypothetical protein.
       0.658
arnB_1
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  0.606
EMR01521.1
Protein of unknown function (DUF2851).
 
      0.557
EMR04701.1
Hypothetical protein.
  
     0.521
EMR01453.1
Putative rhodanese-related sulfurtransferase; Belongs to the UPF0176 family.
       0.499
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.