treS_2 protein (Cesiribacter andamanensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

treS_2

Trehalose synthase/amylase TreS. (549 aa)

Predicted Functional Partners:

treS_1

0.871

glgX

0.830

malQ

0.806

treZ_1

0.804

glgE1

0.786

otsA

0.756

EMR03354.1

0.730

glgB

0.729

otsB

0.708

steT_1

0.609

Your Current Organism:

Cesiribacter andamanensis

NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EMR03354.1	glgB	ADICEAN_01532	ADICEAN_02987	Maltodextrin phosphorylase.	1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	0.972
EMR03354.1	glgE1	ADICEAN_01532	ADICEAN_02985	Maltodextrin phosphorylase.	Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 1; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.	0.566
EMR03354.1	glgX	ADICEAN_01532	ADICEAN_03990	Maltodextrin phosphorylase.	Glycogen debranching enzyme; Belongs to the glycosyl hydrolase 13 family.	0.952
EMR03354.1	malQ	ADICEAN_01532	ADICEAN_03786	Maltodextrin phosphorylase.	4-alpha-glucanotransferase.	0.985
EMR03354.1	otsA	ADICEAN_01532	ADICEAN_03947	Maltodextrin phosphorylase.	Trehalose-phosphate synthase.	0.831
EMR03354.1	treS_1	ADICEAN_01532	ADICEAN_02986	Maltodextrin phosphorylase.	Trehalose synthase/amylase TreS.	0.894
EMR03354.1	treS_2	ADICEAN_01532	ADICEAN_04028	Maltodextrin phosphorylase.	Trehalose synthase/amylase TreS.	0.730
EMR03354.1	treZ_1	ADICEAN_01532	ADICEAN_03989	Maltodextrin phosphorylase.	Malto-oligosyltrehalose trehalohydrolase.	0.909
glgB	EMR03354.1	ADICEAN_02987	ADICEAN_01532	1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	Maltodextrin phosphorylase.	0.972
glgB	glgE1	ADICEAN_02987	ADICEAN_02985	1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 1; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.	0.950
glgB	glgX	ADICEAN_02987	ADICEAN_03990	1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	Glycogen debranching enzyme; Belongs to the glycosyl hydrolase 13 family.	0.976
glgB	malQ	ADICEAN_02987	ADICEAN_03786	1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	4-alpha-glucanotransferase.	0.992
glgB	otsA	ADICEAN_02987	ADICEAN_03947	1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	Trehalose-phosphate synthase.	0.844
glgB	otsB	ADICEAN_02987	ADICEAN_02606	1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	Trehalose-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.	0.532
glgB	treS_1	ADICEAN_02987	ADICEAN_02986	1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	Trehalose synthase/amylase TreS.	0.964
glgB	treS_2	ADICEAN_02987	ADICEAN_04028	1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	Trehalose synthase/amylase TreS.	0.729
glgB	treZ_1	ADICEAN_02987	ADICEAN_03989	1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	Malto-oligosyltrehalose trehalohydrolase.	0.541
glgE1	EMR03354.1	ADICEAN_02985	ADICEAN_01532	Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 1; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.	Maltodextrin phosphorylase.	0.566
glgE1	glgB	ADICEAN_02985	ADICEAN_02987	Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 1; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.	1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.	0.950
glgE1	glgX	ADICEAN_02985	ADICEAN_03990	Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 1; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.	Glycogen debranching enzyme; Belongs to the glycosyl hydrolase 13 family.	0.757