STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMR00837.1ATPase involved in DNA repair. (1582 aa)    
Predicted Functional Partners:
EMR02067.1
Hypothetical protein.
 
     0.794
yqiK
Inner membrane protein yqiK.
 
     0.794
EMR02066.1
Phage shock protein A.
 
     0.761
EMR02065.1
Hypothetical protein.
 
     0.745
EMR02064.1
Helix-turn-helix protein.
 
     0.589
mtfA_2
Mlc titration factor A; Belongs to the MtfA family.
  
     0.477
EMR02276.1
RDD family protein.
 
    0.472
EMR00836.1
Hypothetical protein.
       0.421
EMR00637.1
Putative transcriptional regulator; Belongs to the GbsR family.
  
     0.415
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.