STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMR00697.1Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. (145 aa)    
Predicted Functional Partners:
EMR01117.1
Outer membrane channel protein.
  
  
  0.780
macA_2
Macrolide-specific efflux protein macA precursor.
 
 0.754
macB_14
Macrolide export ATP-binding/permease protein MacB.
 
   0.707
czcB
Cation efflux system protein CzcB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.706
ttgA
Putative efflux pump periplasmic linker ttgA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.688
EMR01138.1
Multidrug resistance protein MdtN.
  
 0.688
macB_15
Macrolide export ATP-binding/permease protein MacB.
 
   0.686
bepF
Efflux pump periplasmic linker BepF; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.668
macA_1
Macrolide-specific efflux protein macA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.657
mexA
Multidrug resistance protein mexA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.657
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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