STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380565_03455Unannotated protein. (340 aa)    
Predicted Functional Partners:
GCA_000380565_03094
Unannotated protein.
    
 0.867
GCA_000380565_04182
Unannotated protein.
     
  0.841
GCA_000380565_00457
Unannotated protein.
    
 0.701
GCA_000380565_02527
Unannotated protein.
  
 0.669
GCA_000380565_00292
Unannotated protein.
     
 0.634
GCA_000380565_02589
Unannotated protein.
  
 
 0.617
GCA_000380565_01663
Unannotated protein.
  
 
 0.616
GCA_000380565_03189
Unannotated protein.
 
 0.611
GCA_000380565_00083
Unannotated protein.
   
 
  0.596
GCA_000380565_02930
Unannotated protein.
   
 
  0.595
Your Current Organism:
Microbulbifer variabilis
NCBI taxonomy Id: 1279017
Other names: M. variabilis ATCC 700307, Microbulbifer variabilis ATCC 700307
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.