STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381985_01039Unannotated protein. (169 aa)    
Predicted Functional Partners:
GCA_000381985_01037
Unannotated protein.
      0.918
GCA_000381985_01040
Unannotated protein.
 
     0.907
GCA_000381985_01038
Unannotated protein.
     0.854
GCA_000381985_03832
Unannotated protein.
     0.594
GCA_000381985_01041
Unannotated protein.
 
     0.558
GCA_000381985_02528
Unannotated protein.
  
 
 0.533
GCA_000381985_02568
Unannotated protein.
  
 
 0.533
GCA_000381985_00575
Unannotated protein.
 
    0.523
GCA_000381985_03270
Unannotated protein.
   
 
  0.483
Your Current Organism:
Novispirillum itersonii
NCBI taxonomy Id: 1279038
Other names: N. itersonii subsp. itersonii ATCC 12639, Novispirillum itersonii subsp. itersonii ATCC 12639
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.