STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381985_01903Unannotated protein. (327 aa)    
Predicted Functional Partners:
GCA_000381985_00541
Unannotated protein.
  
  
 0.942
GCA_000381985_01901
Unannotated protein.
 
     0.792
GCA_000381985_02998
Unannotated protein.
     
 0.570
GCA_000381985_01904
Unannotated protein.
       0.538
GCA_000381985_02888
Unannotated protein.
  
     0.537
GCA_000381985_01902
Unannotated protein.
       0.531
GCA_000381985_00290
Unannotated protein.
 
   
 0.486
GCA_000381985_00614
Unannotated protein.
  
    0.479
GCA_000381985_01468
Unannotated protein.
     
 0.472
GCA_000381985_01581
Unannotated protein.
    
 0.470
Your Current Organism:
Novispirillum itersonii
NCBI taxonomy Id: 1279038
Other names: N. itersonii subsp. itersonii ATCC 12639, Novispirillum itersonii subsp. itersonii ATCC 12639
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.