STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381985_03168Unannotated protein. (317 aa)    
Predicted Functional Partners:
GCA_000381985_03166
Unannotated protein.
 
     0.825
GCA_000381985_03167
Unannotated protein.
 
     0.796
GCA_000381985_03406
Unannotated protein.
    
  0.664
GCA_000381985_03169
Unannotated protein.
       0.486
GCA_000381985_00419
Unannotated protein.
    
  0.477
GCA_000381985_00734
Unannotated protein.
  
     0.442
GCA_000381985_00356
Unannotated protein.
 
 
 0.431
GCA_000381985_02132
Unannotated protein.
 
 
 0.419
GCA_000381985_02633
Unannotated protein.
    
 
 0.415
GCA_000381985_02184
Unannotated protein.
  
     0.400
Your Current Organism:
Novispirillum itersonii
NCBI taxonomy Id: 1279038
Other names: N. itersonii subsp. itersonii ATCC 12639, Novispirillum itersonii subsp. itersonii ATCC 12639
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.