STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381985_03670Unannotated protein. (389 aa)    
Predicted Functional Partners:
GCA_000381985_03671
Unannotated protein.
 
  
 0.868
GCA_000381985_03669
Unannotated protein.
   
 0.744
GCA_000381985_03778
Unannotated protein.
 
  
 0.644
GCA_000381985_00961
Unannotated protein.
    
 0.621
GCA_000381985_01227
Unannotated protein.
 
  
 0.583
GCA_000381985_01506
Unannotated protein.
  
    0.582
GCA_000381985_01726
Unannotated protein.
  
    0.582
GCA_000381985_00821
Unannotated protein.
 
    0.568
GCA_000381985_01883
Unannotated protein.
 
  
 0.520
GCA_000381985_01253
Unannotated protein.
 
  
 0.474
Your Current Organism:
Novispirillum itersonii
NCBI taxonomy Id: 1279038
Other names: N. itersonii subsp. itersonii ATCC 12639, Novispirillum itersonii subsp. itersonii ATCC 12639
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.