STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FFUJ_01054Related to surfeit locus protein 4. (302 aa)    
Predicted Functional Partners:
FFUJ_01201
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 
 0.932
FFUJ_07314
Probable ERV25 protein (Component of the COPII-coated vesicles).
   
 0.867
FFUJ_07468
Related to p24 protein, involved in membrane trafficking.
   
 0.865
FFUJ_01193
Probable EMP24, component of the COPII-coated vesicles.
   
 0.852
FFUJ_01847
ER lumen protein-retaining receptor.
   
 0.833
FFUJ_03918
Related to endoplasmic reticulum retention receptor.
   
 0.810
FFUJ_05617
Uncharacterized protein.
   
 0.790
FFUJ_13311
Related to ERP2-p24 protein involved in membrane trafficking.
   
 0.786
FFUJ_12288
Related to D.melanogaster heat shock protein 67B2.
  
 
  0.753
FFUJ_12999
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
  0.743
Your Current Organism:
Fusarium fujikuroi
NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289
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