STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FFUJ_02250Related to phthalate 4,5-dioxygenase oxygenase reductase subunit. (561 aa)    
Predicted Functional Partners:
FFUJ_14513
Related to nitrate reductase.
    
 0.670
FFUJ_12277
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.670
apf12
Cytochrome b5-like reductase apf12; Cytochrome b5-like reductase; part of the gene cluster that mediates the biosynthesis of the cyclic tetrapeptide apicidin F (APF). The non-ribosomal peptide synthetase apf1 incorporates four different amino acids to produce apicidin F: L- phenylalanine, D-pipecolic acid (D-pip), N-methoxy-L-tryptophan and L- 2-aminooctanedioic acid. L-Phenylalanine is the only proteinogenic amino acid directly used by apf1. The 3 other apf1 substrates are non-proteinogenic and have to be modified by other enzymes of the cluster. Lysine is converted to delta-1-pyrroli [...]
    
 0.669
FFUJ_04230
Related to cytochrome b-type NAD(P)H oxidoreductase.
    
 0.669
FFUJ_02533
Related to YJU2-Essential nuclear protein, putative spliceosomal component.
   
    0.487
MED11
Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
   
    0.457
HCR1
Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
    
 
 0.437
FFUJ_13475
Related to mitotic apparatus protein p62.
   
  0.408
FFUJ_14415
Uncharacterized protein.
   
  0.407
FFUJ_02030
Uncharacterized protein.
   
  0.407
Your Current Organism:
Fusarium fujikuroi
NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289
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