Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FFUJ_00687 | FFUJ_01459 | S0DK10 | S0DIJ7 | Related to actin-like protein; Belongs to the actin family. | Uncharacterized protein. | 0.865 |
FFUJ_00687 | FFUJ_02477 | S0DK10 | S0DSK3 | Related to actin-like protein; Belongs to the actin family. | Probable TPM2-tropomyosin, isoform 2. | 0.860 |
FFUJ_00687 | FFUJ_02611 | S0DK10 | S0DZ82 | Related to actin-like protein; Belongs to the actin family. | Probable Actin. | 0.994 |
FFUJ_00687 | FFUJ_03316 | S0DK10 | S0DV07 | Related to actin-like protein; Belongs to the actin family. | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | 0.997 |
FFUJ_00687 | FFUJ_04658 | S0DK10 | S0DRE9 | Related to actin-like protein; Belongs to the actin family. | Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations. | 0.888 |
FFUJ_00687 | FFUJ_05778 | S0DK10 | S0E7A6 | Related to actin-like protein; Belongs to the actin family. | Related to cofilin; Belongs to the actin-binding proteins ADF family. | 0.893 |
FFUJ_00687 | FFUJ_06156 | S0DK10 | S0E695 | Related to actin-like protein; Belongs to the actin family. | Related to component of actin cortical patches LAS17. | 0.755 |
FFUJ_00687 | FFUJ_06233 | S0DK10 | S0ED00 | Related to actin-like protein; Belongs to the actin family. | Related to myosin II; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.697 |
FFUJ_01459 | FFUJ_00687 | S0DIJ7 | S0DK10 | Uncharacterized protein. | Related to actin-like protein; Belongs to the actin family. | 0.865 |
FFUJ_01459 | FFUJ_02611 | S0DIJ7 | S0DZ82 | Uncharacterized protein. | Probable Actin. | 0.980 |
FFUJ_01459 | FFUJ_03316 | S0DIJ7 | S0DV07 | Uncharacterized protein. | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | 0.860 |
FFUJ_01459 | FFUJ_08343 | S0DIJ7 | S0EAC6 | Uncharacterized protein. | Probable actin-related protein 3 (ARP3); Belongs to the actin family. | 0.876 |
FFUJ_01459 | FFUJ_09971 | S0DIJ7 | S0ELS1 | Uncharacterized protein. | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | 0.860 |
FFUJ_02477 | FFUJ_00687 | S0DSK3 | S0DK10 | Probable TPM2-tropomyosin, isoform 2. | Related to actin-like protein; Belongs to the actin family. | 0.860 |
FFUJ_02477 | FFUJ_02611 | S0DSK3 | S0DZ82 | Probable TPM2-tropomyosin, isoform 2. | Probable Actin. | 0.978 |
FFUJ_02477 | FFUJ_03316 | S0DSK3 | S0DV07 | Probable TPM2-tropomyosin, isoform 2. | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | 0.848 |
FFUJ_02477 | FFUJ_04658 | S0DSK3 | S0DRE9 | Probable TPM2-tropomyosin, isoform 2. | Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations. | 0.516 |
FFUJ_02477 | FFUJ_05778 | S0DSK3 | S0E7A6 | Probable TPM2-tropomyosin, isoform 2. | Related to cofilin; Belongs to the actin-binding proteins ADF family. | 0.620 |
FFUJ_02477 | FFUJ_06156 | S0DSK3 | S0E695 | Probable TPM2-tropomyosin, isoform 2. | Related to component of actin cortical patches LAS17. | 0.680 |
FFUJ_02477 | FFUJ_06233 | S0DSK3 | S0ED00 | Probable TPM2-tropomyosin, isoform 2. | Related to myosin II; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.962 |
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