STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FFUJ_07451Related to microtubule-interacting protein. (480 aa)    
Predicted Functional Partners:
FFUJ_04892
Related to UV-damaged DNA-binding protein.
    
 0.993
FFUJ_08655
Related to cullin homolog 4A; Belongs to the cullin family.
    
 0.978
FFUJ_07180
Related to DNA repair protein RAD26.
    
 0.976
FFUJ_07929
Related to DNA repair helicase ERCC6.
    
 0.976
FFUJ_07881
Probable ring-box protein 1.
    
 0.971
FFUJ_14376
Uncharacterized protein.
    
 0.967
FFUJ_00929
Uncharacterized protein.
    
  0.947
FFUJ_00736
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.947
FFUJ_03478
Related to DNA-directed RNA polymerase II chain RPB9.
    
 0.943
FFUJ_09462
Related to DNA-directed RNA polymerase small Zn-binding chain.
   
  0.941
Your Current Organism:
Fusarium fujikuroi
NCBI taxonomy Id: 1279085
Other names: F. fujikuroi IMI 58289, Fusarium fujikuroi IMI 58289, Fusarium fujikuroi IMI58289, Gibberella fujikuroi IMI 58289
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