Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FFUJ_01077 | FFUJ_01207 | S0DLW3 | S0DNT1 | Probable ubiquinol-cytochrome-c reductase cytochrome c1. | Uncharacterized protein. | 0.999 |
FFUJ_01077 | FFUJ_02167 | S0DLW3 | S0DXN7 | Probable ubiquinol-cytochrome-c reductase cytochrome c1. | Related to lipase/esterase. | 0.541 |
FFUJ_01077 | FFUJ_04162 | S0DLW3 | S0DQB1 | Probable ubiquinol-cytochrome-c reductase cytochrome c1. | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | 0.999 |
FFUJ_01077 | FFUJ_04893 | S0DLW3 | S0DNB3 | Probable ubiquinol-cytochrome-c reductase cytochrome c1. | Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.999 |
FFUJ_01077 | FFUJ_05928 | S0DLW3 | S0EC84 | Probable ubiquinol-cytochrome-c reductase cytochrome c1. | Abhydrolase_3 domain-containing protein. | 0.541 |
FFUJ_01077 | FFUJ_07154 | S0DLW3 | S0E0R0 | Probable ubiquinol-cytochrome-c reductase cytochrome c1. | Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. | 0.999 |
FFUJ_01077 | FFUJ_08121 | S0DLW3 | S0EA62 | Probable ubiquinol-cytochrome-c reductase cytochrome c1. | Related to lipase/esterase. | 0.541 |
FFUJ_01077 | FFUJ_11350 | S0DLW3 | S0EL12 | Probable ubiquinol-cytochrome-c reductase cytochrome c1. | Related to triacylglycerol lipase. | 0.541 |
FFUJ_01077 | FFUJ_11647 | S0DLW3 | S0ELZ9 | Probable ubiquinol-cytochrome-c reductase cytochrome c1. | Related to triacylglycerol lipase. | 0.541 |
FFUJ_01077 | FFUJ_14026 | S0DLW3 | S0EBG0 | Probable ubiquinol-cytochrome-c reductase cytochrome c1. | Related to Putative sterigmatocystin biosynthesis lipase/esterase STCI. | 0.541 |
FFUJ_01207 | FFUJ_01077 | S0DNT1 | S0DLW3 | Uncharacterized protein. | Probable ubiquinol-cytochrome-c reductase cytochrome c1. | 0.999 |
FFUJ_01207 | FFUJ_02167 | S0DNT1 | S0DXN7 | Uncharacterized protein. | Related to lipase/esterase. | 0.480 |
FFUJ_01207 | FFUJ_04162 | S0DNT1 | S0DQB1 | Uncharacterized protein. | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | 0.985 |
FFUJ_01207 | FFUJ_04893 | S0DNT1 | S0DNB3 | Uncharacterized protein. | Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.999 |
FFUJ_01207 | FFUJ_05928 | S0DNT1 | S0EC84 | Uncharacterized protein. | Abhydrolase_3 domain-containing protein. | 0.480 |
FFUJ_01207 | FFUJ_07154 | S0DNT1 | S0E0R0 | Uncharacterized protein. | Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. | 0.999 |
FFUJ_01207 | FFUJ_08121 | S0DNT1 | S0EA62 | Uncharacterized protein. | Related to lipase/esterase. | 0.480 |
FFUJ_01207 | FFUJ_11350 | S0DNT1 | S0EL12 | Uncharacterized protein. | Related to triacylglycerol lipase. | 0.480 |
FFUJ_01207 | FFUJ_11647 | S0DNT1 | S0ELZ9 | Uncharacterized protein. | Related to triacylglycerol lipase. | 0.480 |
FFUJ_01207 | FFUJ_14026 | S0DNT1 | S0EBG0 | Uncharacterized protein. | Related to Putative sterigmatocystin biosynthesis lipase/esterase STCI. | 0.480 |
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