STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000455485_01518Unannotated protein. (484 aa)    
Predicted Functional Partners:
GCA_000455485_01953
Unannotated protein.
     0.883
GCA_000455485_01517
Unannotated protein.
 
    0.755
GCA_000455485_01516
Unannotated protein.
       0.647
GCA_000455485_02275
Unannotated protein.
 
  
 0.629
GCA_000455485_00373
Unannotated protein.
 
  
 0.606
GCA_000455485_04951
Unannotated protein.
 
  
 0.606
GCA_000455485_03436
Unannotated protein.
  
  
 0.586
GCA_000455485_01515
Unannotated protein.
       0.583
GCA_000455485_01756
Unannotated protein.
 
    0.534
GCA_000455485_01479
Unannotated protein.
  
  
 0.486
Your Current Organism:
Gorillibacterium massiliense
NCBI taxonomy Id: 1280390
Other names: CSUR P290, DSM 27179, G. massiliense, Gorillibacterium massiliense Keita et al. 2017, Paenibacillaceae bacterium G5, strain G5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.