STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000455485_03156Unannotated protein. (233 aa)    
Predicted Functional Partners:
GCA_000455485_03150
Unannotated protein.
  
 
  0.809
GCA_000455485_02784
Unannotated protein.
  
 
  0.807
GCA_000455485_03153
Unannotated protein.
  
 
  0.802
GCA_000455485_02785
Unannotated protein.
  
 
  0.795
GCA_000455485_00689
Unannotated protein.
  
 
  0.785
GCA_000455485_02790
Unannotated protein.
 
  
  0.781
GCA_000455485_02630
Unannotated protein.
  
 
  0.736
GCA_000455485_03157
Unannotated protein.
       0.714
GCA_000455485_03338
Unannotated protein.
  
 
 0.707
GCA_000455485_03653
Unannotated protein.
  
 
  0.705
Your Current Organism:
Gorillibacterium massiliense
NCBI taxonomy Id: 1280390
Other names: CSUR P290, DSM 27179, G. massiliense, Gorillibacterium massiliense Keita et al. 2017, Paenibacillaceae bacterium G5, strain G5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.