STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000455485_03493Unannotated protein. (362 aa)    
Predicted Functional Partners:
GCA_000455485_03492
Unannotated protein.
       0.771
GCA_000455485_01977
Unannotated protein.
  
     0.529
GCA_000455485_00189
Unannotated protein.
  
     0.456
GCA_000455485_00391
Unannotated protein.
  
     0.451
GCA_000455485_03494
Unannotated protein.
       0.449
GCA_000455485_04813
Unannotated protein.
  
     0.425
GCA_000455485_00152
Unannotated protein.
  
     0.423
GCA_000455485_05041
Unannotated protein.
  
     0.413
GCA_000455485_02545
Unannotated protein.
  
     0.408
GCA_000455485_01857
Unannotated protein.
  
     0.405
Your Current Organism:
Gorillibacterium massiliense
NCBI taxonomy Id: 1280390
Other names: CSUR P290, DSM 27179, G. massiliense, Gorillibacterium massiliense Keita et al. 2017, Paenibacillaceae bacterium G5, strain G5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.