STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXFE_00010Putative FAD-linked oxidoreductase. (964 aa)    
Predicted Functional Partners:
acrB
acryloyl-CoA reductase electron transfer subunit gamma.
  
 
 0.989
gltB2
Glutamate synthase [NADPH] large chain.
   
 0.967
AXFE_29000
Putative oxidoreductase/MSMEI_1564.
  
 0.943
sdhB
Succinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
   
 0.916
cdr
Coenzyme A disulfide reductase.
  
 
 0.910
lldD
L-lactate dehydrogenase; Cytochrome.
  
 0.907
AXFE_34510
Lactate 2-monooxygenase.
  
 0.907
hycG2
Formate hydrogenlyase subunit 7.
   
 0.898
lutB
Lactate utilization protein B.
 
 0.893
AXFE_30700
Indolepyruvate ferredoxin oxidoreductase.
  
 
 0.892
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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