Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
alsC | ccpA2 | AXFE_17100 | AXFE_24670 | D-allose transport system permease protein AlsC; Belongs to the binding-protein-dependent transport system permease family. | Catabolite control protein A. | 0.715 |
alsC | ccpA3 | AXFE_17100 | AXFE_25300 | D-allose transport system permease protein AlsC; Belongs to the binding-protein-dependent transport system permease family. | Catabolite control protein A. | 0.727 |
alsC | exuR | AXFE_17100 | AXFE_32650 | D-allose transport system permease protein AlsC; Belongs to the binding-protein-dependent transport system permease family. | Putative HTH-type transcriptional repressor ExuR. | 0.735 |
alsC | iolX | AXFE_17100 | AXFE_30830 | D-allose transport system permease protein AlsC; Belongs to the binding-protein-dependent transport system permease family. | Scyllo-inositol 2-dehydrogenase (NAD(+)). | 0.550 |
alsC | mglA | AXFE_17100 | AXFE_00560 | D-allose transport system permease protein AlsC; Belongs to the binding-protein-dependent transport system permease family. | Galactose/methyl galactoside import ATP-binding protein MglA. | 0.996 |
alsC | rbsA | AXFE_17100 | AXFE_17090 | D-allose transport system permease protein AlsC; Belongs to the binding-protein-dependent transport system permease family. | Ribose import ATP-binding protein RbsA. | 0.999 |
alsC | rbsB | AXFE_17100 | AXFE_17080 | D-allose transport system permease protein AlsC; Belongs to the binding-protein-dependent transport system permease family. | D-ribose-binding periplasmic protein precursor. | 0.999 |
alsC | xylF | AXFE_17100 | AXFE_00570 | D-allose transport system permease protein AlsC; Belongs to the binding-protein-dependent transport system permease family. | D-xylose-binding periplasmic protein precursor. | 0.851 |
alsC | xylH | AXFE_17100 | AXFE_00550 | D-allose transport system permease protein AlsC; Belongs to the binding-protein-dependent transport system permease family. | Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family. | 0.842 |
alsC | ydjH | AXFE_17100 | AXFE_10240 | D-allose transport system permease protein AlsC; Belongs to the binding-protein-dependent transport system permease family. | Putative sugar kinase YdjH. | 0.675 |
ccpA2 | alsC | AXFE_24670 | AXFE_17100 | Catabolite control protein A. | D-allose transport system permease protein AlsC; Belongs to the binding-protein-dependent transport system permease family. | 0.715 |
ccpA2 | mglA | AXFE_24670 | AXFE_00560 | Catabolite control protein A. | Galactose/methyl galactoside import ATP-binding protein MglA. | 0.571 |
ccpA2 | rbsA | AXFE_24670 | AXFE_17090 | Catabolite control protein A. | Ribose import ATP-binding protein RbsA. | 0.552 |
ccpA2 | rbsB | AXFE_24670 | AXFE_17080 | Catabolite control protein A. | D-ribose-binding periplasmic protein precursor. | 0.725 |
ccpA2 | xylH | AXFE_24670 | AXFE_00550 | Catabolite control protein A. | Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family. | 0.471 |
ccpA2 | ydjH | AXFE_24670 | AXFE_10240 | Catabolite control protein A. | Putative sugar kinase YdjH. | 0.467 |
ccpA3 | alsC | AXFE_25300 | AXFE_17100 | Catabolite control protein A. | D-allose transport system permease protein AlsC; Belongs to the binding-protein-dependent transport system permease family. | 0.727 |
ccpA3 | mglA | AXFE_25300 | AXFE_00560 | Catabolite control protein A. | Galactose/methyl galactoside import ATP-binding protein MglA. | 0.582 |
ccpA3 | rbsA | AXFE_25300 | AXFE_17090 | Catabolite control protein A. | Ribose import ATP-binding protein RbsA. | 0.555 |
ccpA3 | rbsB | AXFE_25300 | AXFE_17080 | Catabolite control protein A. | D-ribose-binding periplasmic protein precursor. | 0.721 |
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