Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AXFE_12400 | flgK | AXFE_12400 | AXFE_12220 | Flagellar protein FliS. | Flagellar hook-associated protein 1. | 0.992 |
AXFE_12400 | fliE | AXFE_12400 | AXFE_26290 | Flagellar protein FliS. | Flagellar hook-basal body complex protein FliE. | 0.901 |
AXFE_12400 | mraZ | AXFE_12400 | AXFE_00730 | Flagellar protein FliS. | Protein MraZ; Belongs to the MraZ family. | 0.667 |
flgK | AXFE_12400 | AXFE_12220 | AXFE_12400 | Flagellar hook-associated protein 1. | Flagellar protein FliS. | 0.992 |
flgK | fliE | AXFE_12220 | AXFE_26290 | Flagellar hook-associated protein 1. | Flagellar hook-basal body complex protein FliE. | 0.935 |
flgK | mraZ | AXFE_12220 | AXFE_00730 | Flagellar hook-associated protein 1. | Protein MraZ; Belongs to the MraZ family. | 0.667 |
fliE | AXFE_12400 | AXFE_26290 | AXFE_12400 | Flagellar hook-basal body complex protein FliE. | Flagellar protein FliS. | 0.901 |
fliE | flgK | AXFE_26290 | AXFE_12220 | Flagellar hook-basal body complex protein FliE. | Flagellar hook-associated protein 1. | 0.935 |
fliE | mraZ | AXFE_26290 | AXFE_00730 | Flagellar hook-basal body complex protein FliE. | Protein MraZ; Belongs to the MraZ family. | 0.667 |
ftsL1 | mraY | AXFE_00750 | AXFE_00780 | Cell division protein FtsL. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.752 |
ftsL1 | mraZ | AXFE_00750 | AXFE_00730 | Cell division protein FtsL. | Protein MraZ; Belongs to the MraZ family. | 0.773 |
ftsL1 | murD | AXFE_00750 | AXFE_00790 | Cell division protein FtsL. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.523 |
ftsL1 | murE1 | AXFE_00750 | AXFE_00770 | Cell division protein FtsL. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.752 |
ftsL1 | pbpB1 | AXFE_00750 | AXFE_00760 | Cell division protein FtsL. | Penicillin-binding protein PbpB. | 0.773 |
ftsL1 | rsmH | AXFE_00750 | AXFE_00740 | Cell division protein FtsL. | Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.773 |
mraY | ftsL1 | AXFE_00780 | AXFE_00750 | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | Cell division protein FtsL. | 0.752 |
mraY | mraZ | AXFE_00780 | AXFE_00730 | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | Protein MraZ; Belongs to the MraZ family. | 0.801 |
mraY | murD | AXFE_00780 | AXFE_00790 | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.990 |
mraY | murE1 | AXFE_00780 | AXFE_00770 | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.987 |
mraY | pbpB1 | AXFE_00780 | AXFE_00760 | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | Penicillin-binding protein PbpB. | 0.969 |
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