Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AXFE_01630 | nhaX | AXFE_01630 | AXFE_01640 | Hypothetical protein. | Stress response protein NhaX. | 0.402 |
AXFE_01650 | nhaX | AXFE_01650 | AXFE_01640 | Hypothetical protein. | Stress response protein NhaX. | 0.441 |
AXFE_11940 | nhaX | AXFE_11940 | AXFE_01640 | NAD-dependent malic enzyme. | Stress response protein NhaX. | 0.453 |
AXFE_36080 | nhaX | AXFE_36080 | AXFE_01640 | Ribosome-associated factor Y. | Stress response protein NhaX. | 0.476 |
nhaX | AXFE_01630 | AXFE_01640 | AXFE_01630 | Stress response protein NhaX. | Hypothetical protein. | 0.402 |
nhaX | AXFE_01650 | AXFE_01640 | AXFE_01650 | Stress response protein NhaX. | Hypothetical protein. | 0.441 |
nhaX | AXFE_11940 | AXFE_01640 | AXFE_11940 | Stress response protein NhaX. | NAD-dependent malic enzyme. | 0.453 |
nhaX | AXFE_36080 | AXFE_01640 | AXFE_36080 | Stress response protein NhaX. | Ribosome-associated factor Y. | 0.476 |
nhaX | ogt | AXFE_01640 | AXFE_18940 | Stress response protein NhaX. | methylated-DNA--protein-cysteine methyltransferase. | 0.472 |
ogt | nhaX | AXFE_18940 | AXFE_01640 | methylated-DNA--protein-cysteine methyltransferase. | Stress response protein NhaX. | 0.472 |