STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glkAGlucokinase. (300 aa)    
Predicted Functional Partners:
bglF
PTS system beta-glucoside-specific EIIBCA component.
  
 0.998
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.860
tal3
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 
 0.860
tkt1
Transketolase; Belongs to the transketolase family.
  
 
 0.845
hddC2
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
  
 
 0.812
AXFE_12730
Bifunctional phosphoglucose/phosphomannose isomerase.
 
  
 0.807
yihX
alpha-D-glucose-1-phosphate phosphatase YihX.
  
 
  0.796
bglA
Beta-glucosidase.
  
 
 0.795
galM
Aldose 1-epimerase.
    
 0.781
nagK
N-acetyl-D-glucosamine kinase.
  
     0.775
Your Current Organism:
Acidithrix ferrooxidans
NCBI taxonomy Id: 1280514
Other names: A. ferrooxidans, DSM 28176, JCM 19728, acid streamer bacterium Py-F3, strain PY-F3
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