Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AXFE_12730 | bglF | AXFE_12730 | AXFE_31230 | Bifunctional phosphoglucose/phosphomannose isomerase. | PTS system beta-glucoside-specific EIIBCA component. | 0.909 |
AXFE_12730 | glkA | AXFE_12730 | AXFE_02200 | Bifunctional phosphoglucose/phosphomannose isomerase. | Glucokinase. | 0.807 |
AXFE_12730 | hddC2 | AXFE_12730 | AXFE_28020 | Bifunctional phosphoglucose/phosphomannose isomerase. | D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase. | 0.892 |
AXFE_12730 | nagK | AXFE_12730 | AXFE_19460 | Bifunctional phosphoglucose/phosphomannose isomerase. | N-acetyl-D-glucosamine kinase. | 0.766 |
AXFE_12730 | pgi | AXFE_12730 | AXFE_14860 | Bifunctional phosphoglucose/phosphomannose isomerase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.832 |
AXFE_12730 | tal3 | AXFE_12730 | AXFE_33300 | Bifunctional phosphoglucose/phosphomannose isomerase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family. | 0.832 |
AXFE_12730 | tkt1 | AXFE_12730 | AXFE_07650 | Bifunctional phosphoglucose/phosphomannose isomerase. | Transketolase; Belongs to the transketolase family. | 0.918 |
bglA | bglF | AXFE_24680 | AXFE_31230 | Beta-glucosidase. | PTS system beta-glucoside-specific EIIBCA component. | 0.970 |
bglA | galM | AXFE_24680 | AXFE_03540 | Beta-glucosidase. | Aldose 1-epimerase. | 0.805 |
bglA | glkA | AXFE_24680 | AXFE_02200 | Beta-glucosidase. | Glucokinase. | 0.795 |
bglA | nagK | AXFE_24680 | AXFE_19460 | Beta-glucosidase. | N-acetyl-D-glucosamine kinase. | 0.795 |
bglA | pgi | AXFE_24680 | AXFE_14860 | Beta-glucosidase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.826 |
bglA | tal3 | AXFE_24680 | AXFE_33300 | Beta-glucosidase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family. | 0.826 |
bglF | AXFE_12730 | AXFE_31230 | AXFE_12730 | PTS system beta-glucoside-specific EIIBCA component. | Bifunctional phosphoglucose/phosphomannose isomerase. | 0.909 |
bglF | bglA | AXFE_31230 | AXFE_24680 | PTS system beta-glucoside-specific EIIBCA component. | Beta-glucosidase. | 0.970 |
bglF | galM | AXFE_31230 | AXFE_03540 | PTS system beta-glucoside-specific EIIBCA component. | Aldose 1-epimerase. | 0.890 |
bglF | glkA | AXFE_31230 | AXFE_02200 | PTS system beta-glucoside-specific EIIBCA component. | Glucokinase. | 0.998 |
bglF | hddC2 | AXFE_31230 | AXFE_28020 | PTS system beta-glucoside-specific EIIBCA component. | D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase. | 0.884 |
bglF | nagK | AXFE_31230 | AXFE_19460 | PTS system beta-glucoside-specific EIIBCA component. | N-acetyl-D-glucosamine kinase. | 0.998 |
bglF | pgi | AXFE_31230 | AXFE_14860 | PTS system beta-glucoside-specific EIIBCA component. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.944 |
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